19 Brainstem and Spinal Cord
The brainstem and spinal cord form the vital connection between the brain and the body, serving as both communication pathways and control centers for essential functions. This chapter examines the anatomy and organization of these structures, including the cranial nerves that provide specialized innervation to the head and neck, and the spinal cord’s role in processing sensory and motor information.
Brainstem
The brainstem is made up of the midbrain, pons, and medulla. It is located between the diencephalon (thalamus and hypothalamus region) and the spinal cord. Almost all connections between the brain and the body must travel through the brainstem. The brainstem also plays an important role in regulating consciousness and critical functions like heart rate and breathing.
The mammillary bodies are located on the ventral side of the hypothalamus. The infundibulum is the stalk between the hypothalamus and the pituitary and is located rostral to the mammillary bodies. The optic tract leaves the diencephalon and crosses the midline at the optic chiasm.

Cranial Nerves
A critical component of the brainstem is the presence of the twelve pairs of cranial nerves, which provide sensory and motor innervation to the head, face, and neck, as well as autonomic innervation to the organs in the abdomen. The first two cranial nerves—olfactory (CN I) and optic (CN II)—are defined as being part of the central nervous system. They carry sensory information: smell and vision, respectively. They enter the forebrain and not the brainstem. The remaining nerves, like spinal nerves, have their axons in the peripheral nervous system. Eye movement requires a coordinated effort from three separate nerves: the oculomotor nerve (CN III) handles most eye movements alongside pupil constriction and eyelid control, the trochlear nerve (CN IV) controls the specific downward and inward gaze (toward nose), and the abducens nerve (CN VI) pulls the eye outward to look to the side. The oculomotor and trochlear nerves exit the brainstem from the midbrain; the trochlear nerve is the only cranial nerve to exit on the dorsal surface of the brainstem. The abducens nerve exits at the junction of the pons and medulla.
The trigeminal nerve (CN V) is the largest cranial nerve and carries both sensory and motor information from the face, including muscles for chewing; axons in this nerve enter and exit from the pons. The facial nerve (CN VII) controls facial expression, taste from the front two-thirds of the tongue, and tear and salivary glands. It enters between the pons and medulla. The vestibulocochlear (CN VIII) nerve also enters at the junction between the pons and medulla; it carries sensory information related to hearing and balance.
The glossopharyngeal (CN IX) and vagus (CN X) nerves carry both sensory and motor information and enter/exit from the medulla. The glossopharyngeal nerve is responsible for movement of the throat muscles for swallowing and taste from the back third of the tongue; the vagus nerve is the primary autonomic cranial nerve and contains parasympathetic fibers that innervate the heart, lungs, and abdominal organs. Finally, the spinal accessory (CN XI) and hypoglossal (CN XII) are motor nerves with the hypoglossal exiting the brainstem from the medulla and the spinal accessory nerve exiting from the cervical spinal cord. The spinal accessory innervates muscles in the neck and shoulder, and the hypoglossal innervates muscles of the tongue.

Spinal Cord
The spinal cord begins at the base of the brainstem. The vertebral column is divided into four main regions: cervical, thoracic, lumbar, and sacral. The spinal cord and spinal nerves that enter and exit the vertebral column are divided into these regions as well. The cervical division consists of eight segments (C1–C8) despite there being only seven cervical vertebrae; spinal nerve C8 exits below the C7 vertebra, whereas the other nerves exit above their respective vertebra. The thoracic segment consists of twelve segments (T1-T12), the lumbar consists of five segments (L1-L5), and the sacral division consists of five segments (S1-S5). The shape of the spinal cord changes over the length of the vertebral column, a result of the function of the spinal nerves. For example, the cervical and lumbar enlargements of the ventral horn send motor information to the hands and arms or feet and legs, so the region where motor neurons are located (ventral horn) is larger there than in segments with minimal motor output.

There are eight cervical spinal nerve segments (C1–C8) despite only seven cervical vertebrae, because C8 exits below the C7 vertebra while every other cervical nerve exits above its matching vertebra.
The spinal cord is part of the central nervous system, but the fibers that leave and enter the spinal cord are located in the peripheral nervous system. These spinal nerves can then extend to or from target tissue throughout the body.

As described in Chapter 16, the spinal cord contains both white matter (myelinated axons) and gray matter (cell bodies and dendrites). The spinal cord reverses the arrangement seen in the cerebral cortex; instead of gray matter forming the outer surface, gray matter sits at the core of the spinal cord, surrounded by white matter.

The white matter in the spinal cord is divided into structures called columns because the axons in these regions are either ascending toward the brain or descending toward the appropriate spinal nerve. The dorsal column is on the dorsal or posterior side of the spinal cord, the ventral column is on the ventral or anterior side of the spinal cord, and the lateral column lies between them. The gray matter is likewise divided into regions called horns. The dorsal horn is the location of sensory synapses, the ventral horn is the location of motor neuron cell bodies, and the lateral horn is the location of cell bodies of the autonomic nervous system. The dorsal root and ventral root consist of the axons of afferent (dorsal) and efferent (ventral) fibers. They combine to form the spinal nerves. Sensory neuron cell bodies are located in the dorsal root ganglion, a gray matter region of the dorsal root.

Afferent fibers coming from the periphery through the spinal nerves enter the spinal cord via the dorsal root. The cell bodies of sensory neurons are located in the dorsal root ganglion, and the axons continue into the spinal cord and typically synapse in the dorsal horn. Interneurons are very short neurons that are a communication link between cell types in the spinal cord. They can be either excitatory or inhibitory depending on their role. They can also cross the midline of the spinal cord. The cell bodies of motor neurons that innervate skeletal muscles are located in the ventral horn. The efferent axons of these neurons leave the spinal cord via the ventral root and then enter the spinal nerve on their way to their target tissue.

Conclusion
The brainstem connects the forebrain to the spinal cord and is the exit or entry point for ten of the twelve cranial nerves, making it responsible for most sensory and motor control of the head, face, and neck. The spinal cord carries sensory information in through its dorsal roots and motor commands out through its ventral roots, with white matter columns and gray matter horns organized to keep these pathways separate. Together, the brainstem and spinal cord form the direct physical link between the central nervous system and the rest of the body.
Key Takeaways
- The brainstem connects the diencephalon to the spinal cord and is responsible for critical body functions.
- The cranial nerves enter and exit the central nervous system primarily through the brainstem.
- The spinal cord is part of the central nervous system, and spinal nerves are part of the peripheral nervous system.
- Like the brain, the spinal cord is made up of both white and gray matter.
Important Terms
- Abducens nerve (CN VI)
- Cervical
- Cranial nerve
- Dorsal column
- Dorsal horn
- Dorsal root
- Dorsal root ganglion
- Facial nerve (CN VII)
- Glossopharyngeal nerve (CN IX)
- Hypoglossal nerve (CN XII)
- Infundibulum
- Interneuron
- Lateral column
- Lateral horn
- Lumbar
- Oculomotor nerve (CN III)
- Sacral
- Spinal accessory nerve (CN XI)
- Spinal nerve
- Thoracic
- Trigeminal nerve (CN V)
- Trochlear nerve (CN IV)
- Vagus nerve (CN X)
- Ventral column
- Ventral horn
- Ventral root
- Vestibulocochlear nerve (CN VIII)
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The cranial nerve that pulls the eye outward to look to the side. It exits the brainstem at the junction of the pons and medulla.
The most rostral division of the vertebral column and spinal cord, consisting of eight segments (C1–C8) despite there being only seven cervical vertebrae.
One of twelve paired nerves that provide sensory and motor innervation to the head, face, and neck, as well as autonomic innervation to the abdominal organs. The olfactory (CN I) and optic (CN II) nerves enter the forebrain and are part of the central nervous system; the remaining ten enter or exit at the level of the brainstem and have their axons in the peripheral nervous system.
The region of spinal cord white matter located on the dorsal, or posterior, side of the spinal cord.
The region of spinal cord gray matter that is the location of sensory synapses.
The bundle of afferent axons that enters the spinal cord on the dorsal side and combines with the ventral root to form the spinal nerve.
A gray matter region of the dorsal root where the cell bodies of sensory neurons are located.
The cranial nerve that controls facial expression, taste from the front two-thirds of the tongue, and tear and salivary glands. It enters the brainstem between the pons and medulla.
The cranial nerve responsible for movement of the throat muscles for swallowing and taste from the back third of the tongue. It carries both sensory and motor information and enters/exits from the medulla.
The cranial nerve that innervates the muscles of the tongue. It is a motor nerve that exits the brainstem from the medulla.
The stalk between the hypothalamus and the pituitary, located rostral to the mammillary bodies.
A short neuron that serves as a communication link between cell types in the spinal cord. Interneurons can be excitatory or inhibitory and can cross the midline of the spinal cord.
The region of spinal cord white matter located between the dorsal and ventral columns.
The region of spinal cord gray matter that is the location of cell bodies of the autonomic nervous system.
The division of the vertebral column and spinal cord caudal to the thoracic division, consisting of five segments (L1–L5).
The cranial nerve that handles most eye movements along with pupil constriction and eyelid control. It exits the brainstem from the midbrain.
The most caudal division of the vertebral column and spinal cord, consisting of five segments (S1–S5).
The cranial nerve that innervates muscles in the neck and shoulder. It is a motor nerve that exits from the cervical spinal cord rather than the brainstem.
A peripheral nerve formed by the combination of the dorsal root and ventral root, carrying afferent and efferent fibers to and from target tissue.
The division of the vertebral column and spinal cord caudal to the cervical division, consisting of twelve segments (T1–T12). It is the largest of the four divisions.
The largest cranial nerve, carrying both sensory and motor information from the face, including the muscles for chewing. Its axons enter and exit from the pons.
The cranial nerve that controls downward and inward gaze, toward the nose. It exits the brainstem from the midbrain and is the only cranial nerve to exit on the dorsal surface of the brainstem.
The primary autonomic cranial nerve, containing parasympathetic fibers that innervate the heart, lungs, and abdominal organs. It carries both sensory and motor information and enters/exits from the medulla.
The region of spinal cord white matter located on the ventral, or anterior, side of the spinal cord.
The region of spinal cord gray matter that is the location of motor neuron cell bodies. The cervical and lumbar enlargements of the ventral horn reflect the greater motor output to the arms and legs.
The bundle of efferent axons that exits the spinal cord on the ventral side and combines with the dorsal root to form the spinal nerve.
The cranial nerve that carries sensory information related to hearing and balance. It enters the brainstem at the junction of the pons and medulla.